WormBase Tree Display for Variation: WBVar01336040
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WBVar01336040 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01336040 | |||||
Other_name | cewivar00026330 | ||||||
Y56A3A.1a.1:c.1224+1390G>A | |||||||
HGVSg | CHROMOSOME_III:g.11840458C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | Y56A3A | |||
Flanking_sequences | CAGCATCTAAGCAGCATATGTATCATGTTTGGGAAAAAGATTGGGTTTTG | ATTCCCGTAATCCATCATATTACGTTGCCCTCTTTCACCGCTACTTGCCG | |||||
Mapping_target | Y56A3A | ||||||
Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (25) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539190716 | |||
Status | Live | ||||||
Affects | Gene | WBGene00003826 | |||||
Transcript | Y56A3A.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y56A3A.1a.1:c.1224+1390G>A | ||||||
Intron_number | 5/9 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |