WormBase Tree Display for Variation: WBVar01392875

WBVar01392875 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01392875
    Other_name: cewivar00737899
      ZK270.2e.1:c.13536+22del
      ZK270.2a.1:c.13503+22del
      ZK270.2b.1:c.1815+22del
      ZK270.2d.1:c.13857+22del
    HGVSg: CHROMOSOME_I:g.14877176del
  Sequence_details: SMap: S_parent: Sequence: F11C3
    Flanking_sequences: CATTTTTGTCCCTTTTTTTTTCAAAAAATCCTGGATCACAAAATCGAATT AAAAAAAAAAAAAAAACTCACTGCATCATGATCAATATCGCCATCAGAGT
    Mapping_target: F11C3
    Type_of_mutation: Deletion: A Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539112383
    Status: Live
  Affects: Gene: WBGene00001488
    Transcript: ZK270.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK270.2b.1:c.1815+22del
        Intron_number: 11/12
      ZK270.2d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK270.2d.1:c.13857+22del
        Intron_number: 13/14
      ZK270.2e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK270.2e.1:c.13536+22del
        Intron_number: 13/13
      ZK270.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK270.2a.1:c.13503+22del
        Intron_number: 12/13
  Reference: WBPaper00037807
  Method: WGS_De_Bono