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WormBase Tree Display for Variation: WBVar01396210

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Name Class

WBVar01396210EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01396210
Other_namecewivar00710298
Y54F10AR.1.1:c.*1067del
HGVSgCHROMOSOME_III:g.2572159del
Sequence_detailsSMapS_parentSequenceY54F10AR
Flanking_sequencesTTTAAGATTTTTTGTTACTAAAAAAGAGGGGGGGGGGGGTCACAAAAAACAAAAAAAACTGTATAAATTATCATTTTCTATAATAAAGAGCTGGGGGTGC
Mapping_targetY54F10AR
Type_of_mutationDeletionAPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539115384
StatusLive
AffectsGeneWBGene00021854
TranscriptY54F10AR.1.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54F10AR.1.1:c.*1067del
cDNA_position1880
Exon_number6/6
ReferenceWBPaper00037807
MethodWGS_De_Bono