WormBase Tree Display for Variation: WBVar01396210
expand all nodes | collapse all nodes | view schema
WBVar01396210 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01396210 | ||||
Other_name | cewivar00710298 | |||||
Y54F10AR.1.1:c.*1067del | ||||||
HGVSg | CHROMOSOME_III:g.2572159del | |||||
Sequence_details | SMap | S_parent | Sequence | Y54F10AR | ||
Flanking_sequences | TTTAAGATTTTTTGTTACTAAAAAAGAGGGGGGGGGGGGTCACAAAAAAC | AAAAAAAACTGTATAAATTATCATTTTCTATAATAAAGAGCTGGGGGTGC | ||||
Mapping_target | Y54F10AR | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539115384 | ||
Status | Live | |||||
Affects | Gene | WBGene00021854 | ||||
Transcript | Y54F10AR.1.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y54F10AR.1.1:c.*1067del | |||||
cDNA_position | 1880 | |||||
Exon_number | 6/6 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |