WormBase Tree Display for Variation: WBVar01398216
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WBVar01398216 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01398216 | ||||
Other_name | cewivar00661556 | |||||
BE10.2.2:c.1257-319del | ||||||
BE10.2.1:c.1257-319del | ||||||
HGVSg | CHROMOSOME_III:g.12794332del | |||||
Sequence_details | SMap | S_parent | Sequence | BE10 | ||
Flanking_sequences | AAATCGATAAAGAATTACGTTATCGGAAATTATTGATTTTTTTCTTCAAG | TGGAATTATAATCAGAAACGTTTCATCAGAAAATGTATATGTTCCGATAA | ||||
Mapping_target | BE10 | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (18) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539117190 | ||
Status | Live | |||||
Affects | Gene | WBGene00007210 | ||||
Transcript | BE10.2.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | BE10.2.2:c.1257-319del | |||||
Intron_number | 8/10 | |||||
BE10.2.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | BE10.2.1:c.1257-319del | |||||
Intron_number | 7/9 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |