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WormBase Tree Display for Variation: WBVar01398400

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Name Class

WBVar01398400EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01398400
Other_namecewivar00739112
W08A12.1e.1:c.1156-73del
W08A12.1c.1:c.1213-73del
W08A12.1b.1:c.1231-73del
W08A12.1a.1:c.1402-73del
W08A12.1d.1:c.1354-73del
W08A12.1b.3:c.1231-73del
W08A12.1b.2:c.1231-73del
HGVSgCHROMOSOME_V:g.3701164del
Sequence_detailsSMapS_parentSequenceW08A12
Flanking_sequencesTCGGAAAGTTTTTCAATTTTTTTTTCTCTGAAAAATCGAAAAACCGACACTTTGATCGCTAAAAAATTTTAAAAAATTATTATTCATTTCAAAAAAAAAA
Mapping_targetW08A12
Type_of_mutationDeletionTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539117355
StatusLive
AffectsGeneWBGene00021078
TranscriptW08A12.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.3:c.1231-73del
Intron_number6/7
W08A12.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1a.1:c.1402-73del
Intron_number6/7
W08A12.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1c.1:c.1213-73del
Intron_number6/7
W08A12.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.2:c.1231-73del
Intron_number7/8
W08A12.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1b.1:c.1231-73del
Intron_number7/8
W08A12.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1d.1:c.1354-73del
Intron_number4/5
W08A12.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW08A12.1e.1:c.1156-73del
Intron_number4/4
ReferenceWBPaper00037807
MethodWGS_De_Bono