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WormBase Tree Display for Variation: WBVar01402013

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Name Class

WBVar01402013EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01402013
Other_namecewivar00675343
Y56A3A.1a.1:c.52-472del
HGVSgCHROMOSOME_III:g.11845867del
Sequence_detailsSMapS_parentSequenceY56A3A
Flanking_sequencesAGTTTCGTTTTTCAACGAGTTTCTTTCATTTTCGTCGGGTTGTGGCAAAGTTTTTTTTTTTTTTGAAAAATTTGATCCTTTTTCGAAACATTGATCTTAA
Mapping_targetY56A3A
Type_of_mutationDeletionTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539196834
StatusLive
AffectsGeneWBGene00003826
TranscriptY56A3A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY56A3A.1a.1:c.52-472del
Intron_number2/9
ReferenceWBPaper00037807
MethodWGS_De_Bono