WormBase Tree Display for Variation: WBVar01402013
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WBVar01402013 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01402013 | ||||
Other_name | cewivar00675343 | |||||
Y56A3A.1a.1:c.52-472del | ||||||
HGVSg | CHROMOSOME_III:g.11845867del | |||||
Sequence_details | SMap | S_parent | Sequence | Y56A3A | ||
Flanking_sequences | AGTTTCGTTTTTCAACGAGTTTCTTTCATTTTCGTCGGGTTGTGGCAAAG | TTTTTTTTTTTTTTGAAAAATTTGATCCTTTTTCGAAACATTGATCTTAA | ||||
Mapping_target | Y56A3A | |||||
Type_of_mutation | Deletion | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539196834 | ||
Status | Live | |||||
Affects | Gene | WBGene00003826 | ||||
Transcript | Y56A3A.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y56A3A.1a.1:c.52-472del | |||||
Intron_number | 2/9 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |