WormBase Tree Display for Variation: WBVar01429555

WBVar01429555 Name: Public_name: tm5858
    Other_name: Y41D4A.5.2:c.-19-592_-19-176delinsAAATATATTTTT
    HGVSg: CHROMOSOME_IV:g.1738060_1738476delinsAAAAATATATTT
  Sequence_details: SMap: S_parent: Sequence: Y41D4A
    Flanking_sequences: tgagaaatgaagaaataatttaaattcaag ggcgccggggatgtgaaggtcaatttttgg
    Mapping_target: Y41D4A
    Source_location: 7 CHROMOSOME_IV 1738059 1738477 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: AAAAATATATTT
      Deletion
    PCR_product: tm5858_external
      tm5858_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5858
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00021507
    Transcript: Y41D4A.5.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y41D4A.5.2:c.-19-592_-19-176delinsAAATATATTTTT
        Intron_number: 1/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 9664/9665-AAAAATATATTT-10081/10082 (417 bp deletion + 12 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele