WormBase Tree Display for Variation: WBVar01429597

WBVar01429597 Name: Public_name: tm5929
    Other_name: C37F5.1b.1:c.1018-244_1201del
      C37F5.1a.1:c.1138-244_1321del
    HGVSg: CHROMOSOME_IV:g.2276279_2276706del
  Sequence_details: SMap: S_parent: Sequence: C37F5
    Flanking_sequences: tttttttctcgctccaaagttcaaactaca gtagctttaaaggctcatacctctatcctt
    Mapping_target: C37F5
    Source_location: 7 CHROMOSOME_IV 2276278 2276707 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5929_external
      tm5929_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00007583
      WBStrain00007592
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5929
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00002990
    Transcript: C37F5.1a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C37F5.1a.1:c.1138-244_1321del
        cDNA_position: ?-1321
        CDS_position: ?-1321
        Protein_position: ?-441
        Intron_number: 5/6
        Exon_number: 6/7
      C37F5.1b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C37F5.1b.1:c.1018-244_1201del
        cDNA_position: ?-1209
        CDS_position: ?-1201
        Protein_position: ?-401
        Intron_number: 4/5
        Exon_number: 5/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 3080/3081-3508/3509 (428 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele