WormBase Tree Display for Variation: WBVar01429607

WBVar01429607 Name: Public_name: tm5926
    Other_name: F46E10.1b.1:c.11-193_283del
      F46E10.1a.1:c.89-193_361del
    HGVSg: CHROMOSOME_V:g.6529029_6529542del
  Sequence_details: SMap: S_parent: Sequence: F46E10
    Flanking_sequences: cacgacagattatgcactttttcggtcact ttggaatttgggggccaaacacatacgagt
    Mapping_target: F46E10
    Source_location: 7 CHROMOSOME_V 6529028 6529543 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5926_external
      tm5926_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5926
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00018488
    Transcript: F46E10.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-273
        CDS_position: ?-226
        Protein_position: ?-76
        Intron_number: 2/8
        Exon_number: 1-3/9
      F46E10.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F46E10.1b.1:c.11-193_283del
        cDNA_position: ?-319
        CDS_position: ?-283
        Protein_position: ?-95
        Intron_number: 2-3/9
        Exon_number: 3-4/10
      F46E10.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F46E10.1a.1:c.89-193_361del
        cDNA_position: ?-467
        CDS_position: ?-361
        Protein_position: ?-121
        Intron_number: 3-4/10
        Exon_number: 4-5/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 21023/21024-21537/21538 (514 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele