WormBase Tree Display for Variation: WBVar01431995
expand all nodes | collapse all nodes | view schema
WBVar01431995 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01431995 | ||||
Other_name | C48B6.6b.1:c.1306C>T | |||||
CE53740:p.Pro436Ser | ||||||
CE30258:p.Pro436Ser | ||||||
C48B6.6a.1:c.1306C>T | ||||||
HGVSg | CHROMOSOME_I:g.6911255G>A | |||||
Sequence_details | SMap | S_parent | Sequence | C48B6 | ||
Flanking_sequences | ATTCATTCCATCGAATATTATCACTATACG | AGTATCTTCACTTTGCTTCAATCGTGACAT | ||||
Mapping_target | C48B6 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193320058 | ||
dbSNP_ss | ss | 295495975 | ||||
Status | Live | |||||
Affects | Gene | WBGene00004879 | ||||
Transcript | C48B6.6b.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
HGVSc | C48B6.6b.1:c.1306C>T | |||||
HGVSp | CE53740:p.Pro436Ser | |||||
cDNA_position | 1306 | |||||
CDS_position | 1306 | |||||
Protein_position | 436 | |||||
Exon_number | 9/42 | |||||
Codon_change | Ccg/Tcg | |||||
Amino_acid_change | P/S | |||||
C48B6.6a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
HGVSc | C48B6.6a.1:c.1306C>T | |||||
HGVSp | CE30258:p.Pro436Ser | |||||
cDNA_position | 1334 | |||||
CDS_position | 1306 | |||||
Protein_position | 436 | |||||
Exon_number | 10/44 | |||||
Codon_change | Ccg/Tcg | |||||
Amino_acid_change | P/S | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |