WormBase Tree Display for Variation: WBVar01445579

WBVar01445579 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01445579
    Other_name: F54D8.3b.2:c.156-139T>C
      F54D8.3b.1:c.156-139T>C
      F54D8.3a.1:c.420-139T>C
    HGVSg: CHROMOSOME_III:g.5079146T>C
  Sequence_details: SMap: S_parent: Sequence: F54D8
    Flanking_sequences: AAAATTTTTGATTGTCCGGACAACCGTAAA CAAAAAAAACTGTTTAGAAAATTAACAGCC
    Mapping_target: F54D8
    Type_of_mutation: Substitution: t c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193332619
        dbSNP_ss ss 295508538
    Status: Live
  Affects: Gene: WBGene00000107
    Transcript: F54D8.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54D8.3b.1:c.156-139T>C
        Intron_number: 3/6
      F54D8.3b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54D8.3b.2:c.156-139T>C
        Intron_number: 3/5
      F54D8.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54D8.3a.1:c.420-139T>C
        Intron_number: 4/7
  Reference: WBPaper00040707
  Method: WGS_Andersen