WormBase Tree Display for Variation: WBVar01449623
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WBVar01449623 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01449623 | ||||
Other_name | Y37D8A.6.2:c.-15-975T>C | |||||
Y37D8A.6.3:c.-15-975T>C | ||||||
HGVSg | CHROMOSOME_III:g.12858886A>G | |||||
Sequence_details | SMap | S_parent | Sequence | Y37D8A | ||
Flanking_sequences | GGAAAATGGGGAAATATTGAAAGGAGGCAG | GAAGCTAGAAAATGTCCTGCCTTCCTTCCT | ||||
Mapping_target | Y37D8A | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193335397 | ||
dbSNP_ss | ss | 295511316 | ||||
Status | Live | |||||
Affects | Gene | WBGene00012548 | ||||
Transcript | Y37D8A.6.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y37D8A.6.2:c.-15-975T>C | |||||
Intron_number | 3/7 | |||||
Y37D8A.6.3 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y37D8A.6.3:c.-15-975T>C | |||||
Intron_number | 2/6 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |