WormBase Tree Display for Variation: WBVar01451401
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WBVar01451401 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01451401 | ||||
Other_name | Y94H6A.5a.1:c.345+5G>A | |||||
HGVSg | CHROMOSOME_IV:g.2703305C>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y94H6A | ||
Flanking_sequences | CCAGCCAATTCCTCGATTTTCATCAATTTT | GCACCTCTTTGACGACTTTAAACGTCTGAA | ||||
Mapping_target | Y94H6A | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00005300 | From_analysis | WGS_Andersen | |||
WBStrain00005301 | From_analysis | WGS_Andersen | ||||
WBStrain00005311 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193337058 | ||
dbSNP_ss | ss | 295512977 | ||||
Status | Live | |||||
Affects | Gene | WBGene00022378 | ||||
Transcript | Y94H6A.5a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y94H6A.5a.1:c.345+5G>A | |||||
Intron_number | 3/16 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |