WormBase Tree Display for Variation: WBVar01451461

WBVar01451461 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01451461
    Other_name: Y54G2A.10b.1:c.-217T>C
      CE27482:p.Ile53=
      Y54G2A.10a.1:c.159T>C
    HGVSg: CHROMOSOME_IV:g.2800253T>C
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: CACTACAAACTTGAATAAGCAAACAGCAAT GCCAAATCGAAGACTGTAGTGAAAAATTGG
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: t c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193337118
        dbSNP_ss ss 295513037
    Status: Live
  Affects: Gene: WBGene00021875
    Transcript: Y54G2A.10a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y54G2A.10a.1:c.159T>C
        HGVSp: CE27482:p.Ile53=
        cDNA_position: 190
        CDS_position: 159
        Protein_position: 53
        Exon_number: 3/6
        Codon_change: atT/atC
        Amino_acid_change: I
      Y54G2A.10b.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.10b.1:c.-217T>C
        cDNA_position: 548
        Exon_number: 1/5
  Reference: WBPaper00040707
  Method: WGS_Andersen