WormBase Tree Display for Variation: WBVar01451484

WBVar01451484 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01451484
    Other_name: Y54G2A.33.2:c.214+572A>T
      Y54G2A.33.1:c.214+572A>T
      Y54G2A.15.1:c.*25T>A
    HGVSg: CHROMOSOME_IV:g.2843260A>T
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: GTTTTAGGGAACTTTTAACCGTTTATTCAA GATCCACACTGAAAAACCATCATCTCAAGG
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: a t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193337141
        dbSNP_ss ss 295513060
    Status: Live
  Affects: Gene: WBGene00021880
      WBGene00021895
    Transcript: Y54G2A.33.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.33.1:c.214+572A>T
        Intron_number: 2/4
      Y54G2A.33.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.33.2:c.214+572A>T
        Intron_number: 2/3
      Y54G2A.15.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.15.1:c.*25T>A
        cDNA_position: 522
        Exon_number: 7/7
  Reference: WBPaper00040707
  Method: WGS_Andersen