WormBase Tree Display for Variation: WBVar01451752
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WBVar01451752 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar01451752 | |||
Other_name | Y37E11C.1b.1:c.1971C>T | ||||
Y37E11C.1c.1:c.1503C>T | |||||
CE31638:p.Ile657= | |||||
CE31639:p.Ile501= | |||||
Y37E11C.1a.1:c.2496C>T | |||||
CE21557:p.Ile832= | |||||
HGVSg | CHROMOSOME_IV:g.3525503C>T | ||||
Sequence_details | SMap | S_parent | Sequence | M57 | |
Flanking_sequences | AAATCGCACCAAAGTAATGGAATCTTCCAT | GATTTTGGCGGCTCCGCGGCGAATCGGCCC | |||
Mapping_target | M57 | ||||
Type_of_mutation | Substitution | c | t | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00005305 | From_analysis | WGS_Andersen | ||
WBStrain00005315 | From_analysis | WGS_Andersen | |||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | WGS_Andersen | ||||
DB_info | Database (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00006769 | |||
Transcript | Y37E11C.1c.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y37E11C.1c.1:c.1503C>T | ||||
HGVSp | CE31639:p.Ile501= | ||||
cDNA_position | 1503 | ||||
CDS_position | 1503 | ||||
Protein_position | 501 | ||||
Exon_number | 4/4 | ||||
Codon_change | atC/atT | ||||
Amino_acid_change | I | ||||
Y37E11C.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y37E11C.1b.1:c.1971C>T | ||||
HGVSp | CE31638:p.Ile657= | ||||
cDNA_position | 1971 | ||||
CDS_position | 1971 | ||||
Protein_position | 657 | ||||
Exon_number | 6/6 | ||||
Codon_change | atC/atT | ||||
Amino_acid_change | I | ||||
Y37E11C.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y37E11C.1a.1:c.2496C>T | ||||
HGVSp | CE21557:p.Ile832= | ||||
cDNA_position | 2496 | ||||
CDS_position | 2496 | ||||
Protein_position | 832 | ||||
Exon_number | 10/11 | ||||
Codon_change | atC/atT | ||||
Amino_acid_change | I | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Andersen |