WormBase Tree Display for Variation: WBVar01452701
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WBVar01452701 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar01452701 | |||
Other_name | C11D2.6k.1:c.26-2170C>T | ||||
C11D2.6l.1:c.26-2170C>T | |||||
C11D2.6j.1:c.26-2170C>T | |||||
C11D2.6i.1:c.26-2170C>T | |||||
C11D2.6m.1:c.80-2170C>T | |||||
C11D2.6n.1:c.80-2170C>T | |||||
C11D2.6o.1:c.80-2170C>T | |||||
C11D2.6p.1:c.80-2170C>T | |||||
HGVSg | CHROMOSOME_IV:g.6173576G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C11D2 | |
Flanking_sequences | GAAAATGACGGAGTTGATCGGCCTTAATAG | TTCTTTTGACTATACTCAAATGAGAAATCC | |||
Mapping_target | C11D2 | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023075 | From_analysis | WGS_Andersen | ||
WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | |||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | WGS_Andersen | ||||
DB_info | Database (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00006809 | |||
Transcript | C11D2.6o.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6o.1:c.80-2170C>T | ||||
Intron_number | 2/28 | ||||
C11D2.6p.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6p.1:c.80-2170C>T | ||||
Intron_number | 2/28 | ||||
C11D2.6i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6i.1:c.26-2170C>T | ||||
Intron_number | 1/28 | ||||
C11D2.6l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6l.1:c.26-2170C>T | ||||
Intron_number | 1/27 | ||||
C11D2.6n.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6n.1:c.80-2170C>T | ||||
Intron_number | 2/27 | ||||
C11D2.6j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6j.1:c.26-2170C>T | ||||
Intron_number | 1/26 | ||||
C11D2.6m.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6m.1:c.80-2170C>T | ||||
Intron_number | 2/29 | ||||
C11D2.6k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6k.1:c.26-2170C>T | ||||
Intron_number | 1/27 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Andersen |