WormBase Tree Display for Variation: WBVar01454405

WBVar01454405 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01454405
    Other_name (19)
    HGVSg: CHROMOSOME_IV:g.11978256G>A
  Sequence_details: SMap: S_parent: Sequence: ZK617
    Flanking_sequences: GTACTCGTGATTTTCGAACAATCCAGTAAC ATGTAGTTCATGTCCTTGACGTTTGATGTA
    Mapping_target: ZK617
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027661 From_analysis: WGS_Andersen
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027669 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193340062
        dbSNP_ss ss 295515981
    Status: Live
  Affects: Gene: WBGene00006759
    Transcript: ZK617.1i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1i.1:c.17265C>T
        HGVSp: CE49956:p.Ile5755=
        cDNA_position: 17265
        CDS_position: 17265
        Protein_position: 5755
        Exon_number: 29/33
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1a.1:c.16383C>T
        HGVSp: CE33017:p.Ile5461=
        cDNA_position: 16510
        CDS_position: 16383
        Protein_position: 5461
        Exon_number: 28/33
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1g.1:c.16410C>T
        HGVSp: CE46868:p.Ile5470=
        cDNA_position: 16410
        CDS_position: 16410
        Protein_position: 5470
        Exon_number: 28/32
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1f.1:c.16647C>T
        HGVSp: CE46948:p.Ile5549=
        cDNA_position: 16647
        CDS_position: 16647
        Protein_position: 5549
        Exon_number: 27/31
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1d.1:c.15222C>T
        HGVSp: CE49926:p.Ile5074=
        cDNA_position: 15222
        CDS_position: 15222
        Protein_position: 5074
        Exon_number: 18/22
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1c.1:c.15723C>T
        HGVSp: CE47057:p.Ile5241=
        cDNA_position: 15984
        CDS_position: 15723
        Protein_position: 5241
        Exon_number: 22/26
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1h.1:c.17292C>T
        HGVSp: CE49973:p.Ile5764=
        cDNA_position: 17292
        CDS_position: 17292
        Protein_position: 5764
        Exon_number: 30/34
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1b.1:c.17340C>T
        HGVSp: CE33018:p.Ile5780=
        cDNA_position: 17340
        CDS_position: 17340
        Protein_position: 5780
        Exon_number: 30/34
        Codon_change: atC/atT
        Amino_acid_change: I
      ZK617.1e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1e.1:c.15171C>T
        HGVSp: CE44668:p.Ile5057=
        cDNA_position: 15171
        CDS_position: 15171
        Protein_position: 5057
        Exon_number: 17/21
        Codon_change: atC/atT
        Amino_acid_change: I
  Reference: WBPaper00040707
  Method: WGS_Andersen