WormBase Tree Display for Variation: WBVar01467188
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WBVar01467188 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01467188 | ||||
Other_name | F25C8.2a.1:c.3+572C>A | |||||
HGVSg | CHROMOSOME_V:g.20902867G>T | |||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||
Flanking_sequences | GATGAAAAGCAACGTAGTAGTTGTTAGAAG | CTCAAAGTGACTGCACCAGTCCAATTTATA | ||||
Mapping_target | F25C8 | |||||
Type_of_mutation | Substitution | g | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023079 | From_analysis | WGS_Andersen | |||
WBStrain00027653 | From_analysis | WGS_Andersen | ||||
WBStrain00027656 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193352491 | ||
dbSNP_ss | ss | 295528410 | ||||
Status | Live | |||||
Affects | Gene | WBGene00000139 | ||||
Transcript | F25C8.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F25C8.2a.1:c.3+572C>A | |||||
Intron_number | 2/7 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |