WormBase Tree Display for Variation: WBVar01467192
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WBVar01467192 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01467192 | ||||
Other_name | CE38330:p.Ser110= | |||||
F25C8.5.1:c.330C>G | ||||||
HGVSg | CHROMOSOME_V:g.20911559C>G | |||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||
Flanking_sequences | CAAAAAAGCAAGAAAGGCAAAAGAAAAGTC | GGAATTGACGTGGTTTCAGAATTCAACTTT | ||||
Mapping_target | F25C8 | |||||
Type_of_mutation | Substitution | c | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023079 | From_analysis | WGS_Andersen | |||
WBStrain00027653 | From_analysis | WGS_Andersen | ||||
WBStrain00027656 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193352494 | ||
dbSNP_ss | ss | 295528413 | ||||
Status | Live | |||||
Affects | Gene | WBGene00044187 | ||||
Transcript | F25C8.5.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | F25C8.5.1:c.330C>G | |||||
HGVSp | CE38330:p.Ser110= | |||||
cDNA_position | 395 | |||||
CDS_position | 330 | |||||
Protein_position | 110 | |||||
Exon_number | 4/10 | |||||
Codon_change | tcC/tcG | |||||
Amino_acid_change | S | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |