WormBase Tree Display for Variation: WBVar01468114
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WBVar01468114 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01468114 | ||||
Other_name | CE28361:p.Val226= | |||||
Y41G9A.1.1:c.678T>G | ||||||
HGVSg | CHROMOSOME_X:g.2986456T>G | |||||
Sequence_details | SMap | S_parent | Sequence | Y41G9A | ||
Flanking_sequences | TGACTAAGCTTAATATATATTTTTTCAGGT | AATATTGGAAATATTCATTTCCGCAAACGT | ||||
Mapping_target | Y41G9A | |||||
Type_of_mutation | Substitution | t | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193353416 | ||
dbSNP_ss | ss | 295529335 | ||||
Status | Live | |||||
Affects | Gene | WBGene00003885 | ||||
Transcript | Y41G9A.1.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y41G9A.1.1:c.678T>G | |||||
HGVSp | CE28361:p.Val226= | |||||
cDNA_position | 693 | |||||
CDS_position | 678 | |||||
Protein_position | 226 | |||||
Exon_number | 8/17 | |||||
Codon_change | gtT/gtG | |||||
Amino_acid_change | V | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |