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WormBase Tree Display for Variation: WBVar01468855

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Name Class

WBVar01468855EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01468855
Other_nameY34B4A.8e.1:c.80-119T>A
Y34B4A.8a.1:c.-65-119T>A
Y34B4A.8c.1:c.80-119T>A
Y34B4A.3.1:c.485-149A>T
Y34B4A.8b.2:c.-1293-119T>A
HGVSgCHROMOSOME_X:g.5276694A>T
Sequence_detailsSMapS_parentSequenceY34B4A
Flanking_sequencesAGAAAGGAAAAGTGACGTAGCGGTCATGTTATTGATTGAATTCGATTTGTGAATTGATAA
Mapping_targetY34B4A
Type_of_mutationSubstitutionat
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193354157
dbSNP_ssss295530076
StatusLive
AffectsGeneWBGene00002031
WBGene00021324
TranscriptY34B4A.8c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8c.1:c.80-119T>A
Intron_number2/16
Y34B4A.8e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8e.1:c.80-119T>A
Intron_number2/15
Y34B4A.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.3.1:c.485-149A>T
Intron_number4/8
Y34B4A.8b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8b.2:c.-1293-119T>A
Intron_number1/15
Y34B4A.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8a.1:c.-65-119T>A
Intron_number1/16
ReferenceWBPaper00040707
MethodWGS_Andersen