WormBase Tree Display for Variation: WBVar01470901

WBVar01470901 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01470901
    Other_name: cewivar00603928
      F11A1.3g.1:c.171+7026C>T
      F11A1.3e.4:c.-7+5712C>T
      F11A1.3e.3:c.-7+6996C>T
      F11A1.3a.1:c.171+7026C>T
      F11A1.3e.1:c.-7+7026C>T
    HGVSg: CHROMOSOME_X:g.10652923C>T
  Sequence_details: SMap: S_parent: Sequence: F11A1
    Flanking_sequences: GTACCACTCAGTTGTAACGAACTTTCTTTT AATCTTCGGATTGTTCTCTCATCATCTAAA
    Mapping_target: F11A1
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006698 From_analysis: WGS_Andersen
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023084 From_analysis: WGS_Andersen
      WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193356203
        dbSNP_ss ss 295532122
    Status: Live
  Affects: Gene: WBGene00000908
    Transcript: F11A1.3e.4 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3e.4:c.-7+5712C>T
        Intron_number: 1/18
      F11A1.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3a.1:c.171+7026C>T
        Intron_number: 2/17
      F11A1.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3e.1:c.-7+7026C>T
        Intron_number: 2/19
      F11A1.3g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3g.1:c.171+7026C>T
        Intron_number: 3/18
      F11A1.3e.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3e.3:c.-7+6996C>T
        Intron_number: 3/20
  Reference: WBPaper00040707
  Method: WGS_Andersen