WormBase Tree Display for Variation: WBVar01473836

WBVar01473836 Name: Public_name: tm6095
    Other_name: E04A4.7.2:c.-8-220_70del
    HGVSg: CHROMOSOME_IV:g.4748372_4748669del
  Sequence_details: SMap: S_parent: Sequence: E04A4
    Flanking_sequences: cggtctttgtggcggtcgagtcaacgacgt actaaaatgacgctgttgaactttttatct
    Mapping_target: E04A4
    Source_location: 7 CHROMOSOME_IV 4748371 4748670 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6095_external
      tm6095_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6095
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017121
    Transcript: E04A4.7.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-78
        CDS_position: ?-70
        Protein_position: ?-24
        Exon_number: 1-2/4
      E04A4.7.2 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: E04A4.7.2:c.-8-220_70del
        cDNA_position: ?-123
        CDS_position: ?-70
        Protein_position: ?-24
        Intron_number: 1/4
        Exon_number: 2-3/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 21636/21637-21934/21935 (298 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele