WormBase Tree Display for Variation: WBVar01474101

WBVar01474101 Name: Public_name: tm6228
    Other_name: F59E10.1.1:c.799_846+326delinsA
    HGVSg: CHROMOSOME_II:g.10875421_10875794delinsA
  Sequence_details: SMap: S_parent: Sequence: F59E10
    Flanking_sequences: gaacttcttgagaatcgggattcggtgaaa aacgatttttagatttttttttagattttc
    Mapping_target: F59E10
    Source_location: 7 CHROMOSOME_II 10875420 10875795 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: A
      Deletion
    PCR_product: tm6228_external
      tm6228_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6228
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003882
    Transcript: F59E10.1.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F59E10.1.1:c.799_846+326delinsA
        cDNA_position: 802-?
        CDS_position: 799-?
        Protein_position: 267-?
        Intron_number: 4/7
        Exon_number: 4/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 4104/4105-A-4478/4479 (374 bp deletion + 1 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele