WormBase Tree Display for Variation: WBVar01513448
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WBVar01513448 | Name | Public_name | WBVar01513448 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00035594 | |||||||
Y94H6A.9a.1:c.672+6G>C | ||||||||
Y94H6A.9d.1:c.678G>C | ||||||||
CE48955:p.Arg226= | ||||||||
Y94H6A.9b.1:c.348+6G>C | ||||||||
HGVSg | CHROMOSOME_IV:g.2722893C>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y94H6A | ||||
Flanking_sequences | TTTCGCTGCTCCAAAACCGTAGTACAAACT | CGTACATTAGTCGTTGGCTCATTCATATTG | ||||||
Mapping_target | Y94H6A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2722891 | 2722891 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022381 | ||||||
Transcript | Y94H6A.9a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y94H6A.9a.1:c.672+6G>C | |||||||
Intron_number | 5/7 | |||||||
Y94H6A.9b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y94H6A.9b.1:c.348+6G>C | |||||||
Intron_number | 2/3 | |||||||
Y94H6A.9d.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y94H6A.9d.1:c.678G>C | |||||||
HGVSp | CE48955:p.Arg226= | |||||||
cDNA_position | 678 | |||||||
CDS_position | 678 | |||||||
Protein_position | 226 | |||||||
Exon_number | 5/5 | |||||||
Codon_change | cgG/cgC | |||||||
Amino_acid_change | R | |||||||
Method | WGS_Flibotte |