WormBase Tree Display for Variation: WBVar01513614
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WBVar01513614 | Name | Public_name | WBVar01513614 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00035784 | |||||||
Y54G2A.11b.1:c.-2359-9T>A | ||||||||
Y54G2A.11a.1:c.506-9T>A | ||||||||
Y54G2A.11b.2:c.-719-9T>A | ||||||||
HGVSg | CHROMOSOME_IV:g.2769853A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | AAGCCCAGGATTGGGGAGTTGTCTGAATTA | AAAAAAATTTTTTGAAATTAATTAGTTAGT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2769851 | 2769851 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021876 | ||||||
Transcript | Y54G2A.11b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.11b.1:c.-2359-9T>A | |||||||
Intron_number | 2/6 | |||||||
Y54G2A.11a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.11a.1:c.506-9T>A | |||||||
Intron_number | 3/7 | |||||||
Y54G2A.11b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.11b.2:c.-719-9T>A | |||||||
Intron_number | 1/6 | |||||||
Method | WGS_Flibotte |