WormBase Tree Display for Variation: WBVar01513635
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WBVar01513635 | Name | Public_name | WBVar01513635 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00035810 | |||||||
Y54G2A.42:n.46A>G | ||||||||
Y54G2A.12.1:c.560-1631T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.2779156A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | GATGAAAGAGATCTGAATCTAGGGCGGGCA | TCAGAACCTTGGAGCTGCTGACAAGGGATC | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2779154 | 2779154 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044486 | ||||||
WBGene00021877 | ||||||||
Transcript | Y54G2A.12.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.12.1:c.560-1631T>C | |||||||
Intron_number | 2/3 | |||||||
Pseudogene | Y54G2A.42 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.42:n.46A>G | |||||||
cDNA_position | 46 | |||||||
Exon_number | 1/3 | |||||||
Method | WGS_Flibotte |