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WormBase Tree Display for Variation: WBVar01513636

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Name Class

WBVar01513636NamePublic_nameWBVar01513636
Other_namecewivar00035814
Y54G2A.42:n.602A>T
Y54G2A.12.1:c.560-2187T>A
HGVSgCHROMOSOME_IV:g.2779712A>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesAAATTTCAGAATTGAGAGAAGCTGGTGCCTTATCACGTTCTTTGATGAGACTTGGATTTA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV27797102779710From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000032From_analysisMillion_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022883From_analysisMillion_mutation_project_reanalysis
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00044486
WBGene00021877
TranscriptY54G2A.12.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.12.1:c.560-2187T>A
Intron_number2/3
PseudogeneY54G2A.42VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScY54G2A.42:n.602A>T
cDNA_position602
Exon_number1/3
MethodWGS_Flibotte