WormBase Tree Display for Variation: WBVar01513710
expand all nodes | collapse all nodes | view schema
WBVar01513710 | Name | Public_name | WBVar01513710 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00035913 | |||||||
Y54G2A.8a.1:c.717G>A | ||||||||
CE31655:p.Leu239= | ||||||||
CE37728:p.Leu205= | ||||||||
Y54G2A.8b.1:c.615G>A | ||||||||
HGVSg | CHROMOSOME_IV:g.2836770G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CATCACCTCACACCCACCTGATCCAACGTT | GGATTTACTAGCACCTCTGTTGGAAGTGAC | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2836768 | 2836768 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021873 | ||||||
Transcript | Y54G2A.8a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.8a.1:c.717G>A | |||||||
HGVSp | CE31655:p.Leu239= | |||||||
cDNA_position | 733 | |||||||
CDS_position | 717 | |||||||
Protein_position | 239 | |||||||
Exon_number | 6/12 | |||||||
Codon_change | ttG/ttA | |||||||
Amino_acid_change | L | |||||||
Y54G2A.8b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.8b.1:c.615G>A | |||||||
HGVSp | CE37728:p.Leu205= | |||||||
cDNA_position | 683 | |||||||
CDS_position | 615 | |||||||
Protein_position | 205 | |||||||
Exon_number | 6/11 | |||||||
Codon_change | ttG/ttA | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |