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WormBase Tree Display for Variation: WBVar01513885

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Name Class

WBVar01513885NamePublic_nameWBVar01513885
Other_namecewivar00036118
Y54G2A.17a.2:c.1551+429A>T
Y54G2A.17a.3:c.1551+429A>T
Y54G2A.17a.1:c.1551+429A>T
Y54G2A.17b.1:c.1611+429A>T
HGVSgCHROMOSOME_IV:g.2872800T>A
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTAAATTCCGGCAATTTGCCGATTTGCCGGAAAAGTTCAATTCGGGCAATTTGTCGATTTCCGAAACTGTTAAATTCCGGCAATTTGCCA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28727982872798From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000032From_analysisMillion_mutation_project_reanalysis
WBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1551+429A>T
Intron_number6/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1611+429A>T
Intron_number7/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1551+429A>T
Intron_number7/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1551+429A>T
Intron_number7/8
MethodWGS_Flibotte