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WormBase Tree Display for Variation: WBVar01513916

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Name Class

WBVar01513916NamePublic_nameWBVar01513916
Other_namecewivar00036150
Y54G2A.17a.1:c.1179+1279A>C
Y54G2A.17a.2:c.1179+1279A>C
Y54G2A.17a.3:c.1179+1279A>C
Y54G2A.17b.1:c.1239+1279A>C
HGVSgCHROMOSOME_IV:g.2877983T>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesACGGGGTTTTTTTTCAAAAAAAAAATCAAATGTGAAAATGATTAAAAATCATTCATATGG
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28779812877981From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1179+1279A>C
Intron_number4/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1239+1279A>C
Intron_number5/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1179+1279A>C
Intron_number5/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1179+1279A>C
Intron_number5/8
MethodWGS_Flibotte