WormBase Tree Display for Variation: WBVar01513922
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WBVar01513922 | Name | Public_name | WBVar01513922 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00036156 | |||||||
Y54G2A.17b.1:c.1092T>C | ||||||||
Y54G2A.17a.3:c.1032T>C | ||||||||
CE46116:p.Phe344= | ||||||||
Y54G2A.17a.2:c.1032T>C | ||||||||
Y54G2A.17a.1:c.1032T>C | ||||||||
CE46281:p.Phe364= | ||||||||
HGVSg | CHROMOSOME_IV:g.2879409A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | GTCATTCGACGCGACAATTGACATTTTCTC | AAGAATTTGTACTCGCCTTTCAGTGTCGAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2879407 | 2879407 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.3:c.1032T>C | |||||||
HGVSp | CE46116:p.Phe344= | |||||||
cDNA_position | 1077 | |||||||
CDS_position | 1032 | |||||||
Protein_position | 344 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | ttT/ttC | |||||||
Amino_acid_change | F | |||||||
Y54G2A.17b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17b.1:c.1092T>C | |||||||
HGVSp | CE46281:p.Phe364= | |||||||
cDNA_position | 1128 | |||||||
CDS_position | 1092 | |||||||
Protein_position | 364 | |||||||
Exon_number | 5/8 | |||||||
Codon_change | ttT/ttC | |||||||
Amino_acid_change | F | |||||||
Y54G2A.17a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.2:c.1032T>C | |||||||
HGVSp | CE46116:p.Phe344= | |||||||
cDNA_position | 1173 | |||||||
CDS_position | 1032 | |||||||
Protein_position | 344 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | ttT/ttC | |||||||
Amino_acid_change | F | |||||||
Y54G2A.17a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.17a.1:c.1032T>C | |||||||
HGVSp | CE46116:p.Phe344= | |||||||
cDNA_position | 1122 | |||||||
CDS_position | 1032 | |||||||
Protein_position | 344 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | ttT/ttC | |||||||
Amino_acid_change | F | |||||||
Method | WGS_Flibotte |