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WormBase Tree Display for Variation: WBVar01513937

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Name Class

WBVar01513937NamePublic_nameWBVar01513937
Other_namecewivar00036172
Y54G2A.17b.1:c.718-297A>T
Y54G2A.17a.3:c.658-297A>T
Y54G2A.17a.2:c.658-297A>T
Y54G2A.17a.1:c.658-297A>T
HGVSgCHROMOSOME_IV:g.2881177T>A
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGGCTTGTCAATGTCGCAGCGGCTGGAAACATTTTTTTTTGAAATCACCGTCAAATTACGA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28811752881175From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.658-297A>T
Intron_number2/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.718-297A>T
Intron_number3/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.658-297A>T
Intron_number3/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.658-297A>T
Intron_number3/8
MethodWGS_Flibotte