WormBase Tree Display for Variation: WBVar01513939
expand all nodes | collapse all nodes | view schema
WBVar01513939 | Name | Public_name | WBVar01513939 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00036174 | |||||||
Y54G2A.17a.1:c.657+148T>C | ||||||||
Y54G2A.17a.2:c.657+148T>C | ||||||||
Y54G2A.17a.3:c.657+148T>C | ||||||||
Y54G2A.17b.1:c.717+148T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.2881499A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TTCATAACTTTTTTGAGAAGTTTTCAAGAA | TTTCATTATGATATTCGGTGTTTTCAGACA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2881497 | 2881497 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.3:c.657+148T>C | |||||||
Intron_number | 2/7 | |||||||
Y54G2A.17b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17b.1:c.717+148T>C | |||||||
Intron_number | 3/7 | |||||||
Y54G2A.17a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.657+148T>C | |||||||
Intron_number | 3/8 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.657+148T>C | |||||||
Intron_number | 3/8 | |||||||
Method | WGS_Flibotte |