WormBase Tree Display for Variation: WBVar01514100
expand all nodes | collapse all nodes | view schema
WBVar01514100 | Name | Public_name | WBVar01514100 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00036399 | |||||||
Y54G2A.25a.1:c.1963-3C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2968364G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CTTCCTCATTTATAACCTCCCATTCGTTCT | CAAAACCAAGAGAGGTCTAGAAATTCATTT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2968362 | 2968362 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002243 | ||||||
Transcript | Y54G2A.25a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y54G2A.25a.1:c.1963-3C>T | |||||||
Intron_number | 14/23 | |||||||
Method | WGS_Flibotte |