WormBase Tree Display for Variation: WBVar01559820
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WBVar01559820 | Name | Public_name | WBVar01559820 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00140354 | |||||||
Y38E10A.21d.1:c.323-2888T>C | ||||||||
Y38E10A.21c.1:c.119-2888T>C | ||||||||
HGVSg | CHROMOSOME_II:g.12666339T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y38E10A | ||||
Flanking_sequences | TCAAGTTCGAGCCCCCAATAACGCGTAAAA | TTTTTAAAGGTTTTTTTTTAAGTTTCGCAG | ||||||
Mapping_target | Y38E10A | |||||||
Source_location | 225 | CHROMOSOME_II | 12666273 | 12666273 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004347 | ||||||
Transcript | Y38E10A.21d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y38E10A.21d.1:c.323-2888T>C | |||||||
Intron_number | 4/8 | |||||||
Y38E10A.21c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y38E10A.21c.1:c.119-2888T>C | |||||||
Intron_number | 2/7 | |||||||
Method | WGS_Flibotte |