WormBase Tree Display for Variation: WBVar01559833
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WBVar01559833 | Name | Public_name | WBVar01559833 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00140367 | |||||||
Y38E10A.21a.1:c.-43C>A | ||||||||
Y38E10A.21c.1:c.119-1572C>A | ||||||||
Y38E10A.21d.1:c.323-1572C>A | ||||||||
HGVSg | CHROMOSOME_II:g.12667655C>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y38E10A | ||||
Flanking_sequences | TTCTTCGTCGTATTCTTCCGTGTGCTCCTG | TTTTTGCATAAATTCTTGTCTAACTTCAGA | ||||||
Mapping_target | Y38E10A | |||||||
Source_location | 225 | CHROMOSOME_II | 12667589 | 12667589 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004347 | ||||||
Transcript | Y38E10A.21a.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y38E10A.21a.1:c.-43C>A | |||||||
cDNA_position | 30 | |||||||
Exon_number | 1/8 | |||||||
Y38E10A.21d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y38E10A.21d.1:c.323-1572C>A | |||||||
Intron_number | 4/8 | |||||||
Y38E10A.21c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y38E10A.21c.1:c.119-1572C>A | |||||||
Intron_number | 2/7 | |||||||
Method | WGS_Flibotte |