WormBase Tree Display for Variation: WBVar01570386
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WBVar01570386 | Name | Public_name | WBVar01570386 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00156531 | |||||||
M02B1.1c.1:c.273T>C | ||||||||
M02B1.1b.1:c.525T>C | ||||||||
CE45668:p.Leu91= | ||||||||
CE37656:p.Leu175= | ||||||||
CE43555:p.Leu215= | ||||||||
M02B1.1a.1:c.645T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.12852431T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | ZK896 | ||||
Flanking_sequences | ATTCGTAGCCGTCGTCGTAGCATGCTGTCT | TCTGGATTTGCTGGAATTTATTTCGAAAAG | ||||||
Mapping_target | ZK896 | |||||||
Source_location | 225 | CHROMOSOME_IV | 12852407 | 12852407 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00005153 | ||||||
Transcript | M02B1.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | M02B1.1b.1:c.525T>C | |||||||
HGVSp | CE37656:p.Leu175= | |||||||
cDNA_position | 525 | |||||||
CDS_position | 525 | |||||||
Protein_position | 175 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | ctT/ctC | |||||||
Amino_acid_change | L | |||||||
M02B1.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | M02B1.1a.1:c.645T>C | |||||||
HGVSp | CE43555:p.Leu215= | |||||||
cDNA_position | 657 | |||||||
CDS_position | 645 | |||||||
Protein_position | 215 | |||||||
Exon_number | 7/9 | |||||||
Codon_change | ctT/ctC | |||||||
Amino_acid_change | L | |||||||
M02B1.1c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | M02B1.1c.1:c.273T>C | |||||||
HGVSp | CE45668:p.Leu91= | |||||||
cDNA_position | 273 | |||||||
CDS_position | 273 | |||||||
Protein_position | 91 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | ctT/ctC | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |