WormBase Tree Display for Variation: WBVar01571400
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WBVar01571400 | Name | Public_name | WBVar01571400 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00157770 | |||||||
CE31484:p.His48= | ||||||||
F19H6.1.1:c.144T>C | ||||||||
F19H6.1.2:c.144T>C | ||||||||
HGVSg | CHROMOSOME_X:g.12391329A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F17E5 | ||||
Flanking_sequences | AAAGCAAACCTGAATCTTTTTGAGTGCCAC | TGTAAATCTACCCATGTACATTGAGCACGG | ||||||
Mapping_target | F17E5 | |||||||
Source_location | 225 | CHROMOSOME_X | 12391261 | 12391261 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008956 | ||||||
Transcript | F19H6.1.2 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F19H6.1.2:c.144T>C | |||||||
HGVSp | CE31484:p.His48= | |||||||
cDNA_position | 152 | |||||||
CDS_position | 144 | |||||||
Protein_position | 48 | |||||||
Exon_number | 2/11 | |||||||
Codon_change | caT/caC | |||||||
Amino_acid_change | H | |||||||
F19H6.1.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F19H6.1.1:c.144T>C | |||||||
HGVSp | CE31484:p.His48= | |||||||
cDNA_position | 146 | |||||||
CDS_position | 144 | |||||||
Protein_position | 48 | |||||||
Exon_number | 2/10 | |||||||
Codon_change | caT/caC | |||||||
Amino_acid_change | H | |||||||
Method | WGS_Flibotte |