WormBase Tree Display for Variation: WBVar01571765
expand all nodes | collapse all nodes | view schema
WBVar01571765 | Name | Public_name | WBVar01571765 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00158196 | |||||||
F16H9.1d.1:c.268-44A>T | ||||||||
F16H9.1b.1:c.310-44A>T | ||||||||
F16H9.2b.1:c.35-19989T>A | ||||||||
F16H9.2a.1:c.-23-19989T>A | ||||||||
F16H9.1c.1:c.253-44A>T | ||||||||
F16H9.1a.1:c.274-44A>T | ||||||||
HGVSg | CHROMOSOME_X:g.12727292A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F22E10 | ||||
Flanking_sequences | CATTTCATCAAACATGTTATTTTCACACAC | CACACACACACACATTCTAAAGGTTTCATA | ||||||
Mapping_target | F22E10 | |||||||
Source_location | 225 | CHROMOSOME_X | 12727222 | 12727222 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008901 | ||||||
WBGene00004345 | ||||||||
Transcript | F16H9.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1a.1:c.274-44A>T | |||||||
Intron_number | 5/6 | |||||||
F16H9.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2b.1:c.35-19989T>A | |||||||
Intron_number | 1/3 | |||||||
F16H9.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1d.1:c.268-44A>T | |||||||
Intron_number | 5/6 | |||||||
F16H9.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1c.1:c.253-44A>T | |||||||
Intron_number | 5/6 | |||||||
F16H9.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2a.1:c.-23-19989T>A | |||||||
Intron_number | 1/4 | |||||||
F16H9.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.1b.1:c.310-44A>T | |||||||
Intron_number | 5/6 | |||||||
Method | WGS_Flibotte |