WormBase Tree Display for Variation: WBVar01573237

WBVar01573237 Name: Public_name: WBVar01573237
    Other_name: cewivar00159845
      R07D5.1c.1:c.-165-1627A>T
      R07D5.1a.1:c.-8-1220A>T
      R07D5.1f.1:c.19-1627A>T
      R07D5.1e.1:c.268-1627A>T
      R07D5.1g.1:c.19-1627A>T
      R07D5.1d.1:c.268-1627A>T
      R07D5.1i.1:c.58-1627A>T
      R07D5.1h.1:c.58-1627A>T
    HGVSg: CHROMOSOME_X:g.15128802T>A
  Sequence_details: SMap: S_parent: Sequence: R07D5
    Flanking_sequences: GGTAAAATAAATCTAAATGTAAAAAAGATT AAAAAAAAAGGATTAAAGGACGATCCGTTCTTCAAGTGCTGTGCACTGCG
    Mapping_target: R07D5
    Source_location: 225 CHROMOSOME_X 15128732 15128732 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00006747
    Transcript: R07D5.1i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1i.1:c.58-1627A>T
        Intron_number: 2/11
      R07D5.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1f.1:c.19-1627A>T
        Intron_number: 1/9
      R07D5.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1h.1:c.58-1627A>T
        Intron_number: 1/9
      R07D5.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1c.1:c.-165-1627A>T
        Intron_number: 1/11
      R07D5.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1a.1:c.-8-1220A>T
        Intron_number: 1/12
      R07D5.1g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1g.1:c.19-1627A>T
        Intron_number: 2/11
      R07D5.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1d.1:c.268-1627A>T
        Intron_number: 1/9
      R07D5.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1e.1:c.268-1627A>T
        Intron_number: 1/10
  Method: WGS_Flibotte