WormBase Tree Display for Variation: WBVar01577841

WBVar01577841 Name: Public_name: WBVar01577841
    Other_name (11)
    HGVSg: CHROMOSOME_III:g.742404T>C
  Sequence_details: SMap: S_parent: Sequence: T17H7
    Flanking_sequences: GGAGGACGTGGGCAAGGACCAGACTTCGGACCACAAGATGACTTCCCAGGACGTAGAGGC CAGGCGGTCCAGAAGGACGTGACGGACGTG
    Mapping_target: T17H7
    Source_location: 225 CHROMOSOME_III 742399 742399 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022856 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00020550
      WBGene00003936
    Transcript: T17H7.4g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4g.1:c.-487+581A>G
        Intron_number: 3/18
      T17H7.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4c.1:c.285+581A>G
        Intron_number: 2/17
      T17H7.4k.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4k.2:c.267+581A>G
        Intron_number: 3/18
      T17H7.4g.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4g.2:c.-487+581A>G
        Intron_number: 2/17
      T17H7.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4b.1:c.285+581A>G
        Intron_number: 2/15
      T17H7.4j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4j.1:c.444+581A>G
        Intron_number: 5/20
      T17H7.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4a.1:c.285+581A>G
        Intron_number: 3/18
      T17H7.4k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T17H7.4k.1:c.267+581A>G
        Intron_number: 3/18
      T17H7.1.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: T17H7.1.1:c.1624T>C
        HGVSp: CE07502:p.Ser542Pro
        cDNA_position: 1630
        CDS_position: 1624
        Protein_position: 542
        Exon_number: 4/5
        Codon_change: Tca/Cca
        Amino_acid_change: S/P
  Method: WGS_Flibotte