WormBase Tree Display for Variation: WBVar01579503
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WBVar01579503 | Name | Public_name | WBVar01579503 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00199813 | |||||||
F54F12.5:n.28C>T | ||||||||
F54F12.3:n.199G>A | ||||||||
HGVSg | CHROMOSOME_III:g.13056577G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F54F12 | ||||
Flanking_sequences | AGCCTAAGCCTAAGCCTAAGCCTAGGCCTAAGCCTAAGCCTAAGCCTAAG | CTGAGCCTAAGCCTAATAGAAAGCCTATCT | ||||||
Mapping_target | F54F12 | |||||||
Source_location | 225 | CHROMOSOME_III | 13056476 | 13056476 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00195333 | ||||||
WBGene00202410 | ||||||||
Transcript | F54F12.5 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54F12.5:n.28C>T | |||||||
cDNA_position | 28 | |||||||
Exon_number | 1/1 | |||||||
F54F12.3 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54F12.3:n.199G>A | |||||||
cDNA_position | 199 | |||||||
Exon_number | 1/1 | |||||||
Method | WGS_Flibotte |