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WormBase Tree Display for Variation: WBVar01580538

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Name Class

WBVar01580538NamePublic_nameWBVar01580538
Other_namecewivar00203578
Y54G2A.17a.3:c.1368+577T>A
Y54G2A.17b.1:c.1428+577T>A
Y54G2A.17a.2:c.1368+577T>A
Y54G2A.17a.1:c.1368+577T>A
HGVSgCHROMOSOME_IV:g.2874618A>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTGTTTCGAAAAAAGATTTCAGAAATGTTTAAAAAAAAAATTTTTTTTAATATTAATCCAT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28746162874616From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1368+577T>A
Intron_number5/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1428+577T>A
Intron_number6/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1368+577T>A
Intron_number6/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1368+577T>A
Intron_number6/8
MethodWGS_Flibotte