WormBase Tree Display for Variation: WBVar01580733
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| WBVar01580733 | Name | Public_name | WBVar01580733 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00204351 | |||||||
| Y37E11C.1a.1:c.1944C>T | ||||||||
| Y37E11C.1c.1:c.951C>T | ||||||||
| Y37E11C.1b.1:c.1419C>T | ||||||||
| CE31639:p.Ala317= | ||||||||
| CE21557:p.Ala648= | ||||||||
| CE31638:p.Ala473= | ||||||||
| HGVSg | CHROMOSOME_IV:g.3523828C>T | |||||||
| Sequence_details | SMap | S_parent | Sequence | M57 | ||||
| Flanking_sequences | GCCGGTCAACTCGGCGACCAGAGTAGCGGC | AAGGATTTTGCCATCGCGCAGAAGGGATCT | ||||||
| Mapping_target | M57 | |||||||
| Source_location | 225 | CHROMOSOME_IV | 3523825 | 3523825 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Substitution | C | T | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00006769 | ||||||
| Transcript | Y37E11C.1c.1 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | |||||||
| HGVSc | Y37E11C.1c.1:c.951C>T | |||||||
| HGVSp | CE31639:p.Ala317= | |||||||
| cDNA_position | 951 | |||||||
| CDS_position | 951 | |||||||
| Protein_position | 317 | |||||||
| Exon_number | 2/4 | |||||||
| Codon_change | gcC/gcT | |||||||
| Amino_acid_change | A | |||||||
| Y37E11C.1b.1 | VEP_consequence | synonymous_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | Y37E11C.1b.1:c.1419C>T | |||||||
| HGVSp | CE31638:p.Ala473= | |||||||
| cDNA_position | 1419 | |||||||
| CDS_position | 1419 | |||||||
| Protein_position | 473 | |||||||
| Exon_number | 4/6 | |||||||
| Codon_change | gcC/gcT | |||||||
| Amino_acid_change | A | |||||||
| Y37E11C.1a.1 | VEP_consequence | synonymous_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | Y37E11C.1a.1:c.1944C>T | |||||||
| HGVSp | CE21557:p.Ala648= | |||||||
| cDNA_position | 1944 | |||||||
| CDS_position | 1944 | |||||||
| Protein_position | 648 | |||||||
| Exon_number | 8/11 | |||||||
| Codon_change | gcC/gcT | |||||||
| Amino_acid_change | A | |||||||
| Method | WGS_Flibotte |
