WormBase Tree Display for Variation: WBVar01601325
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WBVar01601325 | Name | Public_name | WBVar01601325 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00271565 | |||||||
CE46456:p.Leu576= | ||||||||
K10B3.10b.1:c.1728A>T | ||||||||
K10B3.10a.1:c.1728A>T | ||||||||
CE07373:p.Leu576= | ||||||||
HGVSg | CHROMOSOME_X:g.3124252T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | K10B3 | ||||
Flanking_sequences | GAGAGCATTTCCACGTTGACGAGCTCTGTC | AGAAGACGACGACGACGGTCAAGAAGAGCT | ||||||
Mapping_target | K10B3 | |||||||
Source_location | 225 | CHROMOSOME_X | 3124242 | 3124242 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004951 | ||||||
Transcript | K10B3.10a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | K10B3.10a.1:c.1728A>T | |||||||
HGVSp | CE07373:p.Leu576= | |||||||
cDNA_position | 1746 | |||||||
CDS_position | 1728 | |||||||
Protein_position | 576 | |||||||
Exon_number | 5/15 | |||||||
Codon_change | ctA/ctT | |||||||
Amino_acid_change | L | |||||||
K10B3.10b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K10B3.10b.1:c.1728A>T | |||||||
HGVSp | CE46456:p.Leu576= | |||||||
cDNA_position | 1728 | |||||||
CDS_position | 1728 | |||||||
Protein_position | 576 | |||||||
Exon_number | 4/15 | |||||||
Codon_change | ctA/ctT | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |