WormBase Tree Display for Variation: WBVar01602566
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WBVar01602566 | Name | Public_name | WBVar01602566 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (11) | ||||||||
HGVSg | CHROMOSOME_X:g.15131152T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | R07D5 | ||||
Flanking_sequences | ATATTTTTGTTGTCTCTTCATCTCCTTTTT | GGGAGAGCTCAGGGGCCTCCACAAAGAAAT | ||||||
Mapping_target | R07D5 | |||||||
Source_location | 225 | CHROMOSOME_X | 15131082 | 15131082 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00199254 | ||||||
WBGene00006747 | ||||||||
WBGene00196247 | ||||||||
Transcript | R07D5.1i.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1i.1:c.57+601A>G | |||||||
Intron_number | 2/11 | |||||||
R07D5.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1f.1:c.18+3426A>G | |||||||
Intron_number | 1/9 | |||||||
R07D5.1h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1h.1:c.57+601A>G | |||||||
Intron_number | 1/9 | |||||||
R07D5.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1c.1:c.-165-3977A>G | |||||||
Intron_number | 1/11 | |||||||
R07D5.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1a.1:c.-8-3570A>G | |||||||
Intron_number | 1/12 | |||||||
R07D5.1g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1g.1:c.18+3426A>G | |||||||
Intron_number | 2/11 | |||||||
R07D5.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1d.1:c.268-3977A>G | |||||||
Intron_number | 1/9 | |||||||
R07D5.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1e.1:c.268-3977A>G | |||||||
Intron_number | 1/10 | |||||||
R07D5.4 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.4:n.69T>C | |||||||
cDNA_position | 69 | |||||||
Exon_number | 1/1 | |||||||
R07D5.6 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.6:n.64A>G | |||||||
cDNA_position | 64 | |||||||
Exon_number | 1/1 | |||||||
Method | WGS_Flibotte |