WormBase Tree Display for Variation: WBVar01606878
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WBVar01606878 | Name | Public_name | WBVar01606878 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00285099 | |||||||
Y39A3B.5f.1:c.547-290G>A | ||||||||
Y39A3B.5e.1:c.547-290G>A | ||||||||
Y39A3B.5d.1:c.673-290G>A | ||||||||
Y39A3B.5b.1:c.673-290G>A | ||||||||
Y39A3B.5a.1:c.547-290G>A | ||||||||
HGVSg | CHROMOSOME_III:g.2014132C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y39A3B | ||||
Flanking_sequences | TTATCGATTTTCCGTAGAAGTATTGATTTTTCCTTAAAATTATCGATTTT | CGTAAAAGTATTGATTTTTAGTGAAATTATCGATTTTCCT | ||||||
Mapping_target | Y39A3B | |||||||
Source_location | 225 | CHROMOSOME_III | 2014122 | 2014122 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021439 | ||||||
Transcript | Y39A3B.5d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5d.1:c.673-290G>A | |||||||
Intron_number | 6/14 | |||||||
Y39A3B.5b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5b.1:c.673-290G>A | |||||||
Intron_number | 5/12 | |||||||
Y39A3B.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5f.1:c.547-290G>A | |||||||
Intron_number | 4/11 | |||||||
Y39A3B.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5e.1:c.547-290G>A | |||||||
Intron_number | 6/13 | |||||||
Y39A3B.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39A3B.5a.1:c.547-290G>A | |||||||
Intron_number | 6/14 | |||||||
Method | WGS_Flibotte |