WormBase Tree Display for Variation: WBVar01609391
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WBVar01609391 | Name | Public_name | WBVar01609391 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00288565 | |||||||
Y54G2A.17b.1:c.1239+1318A>T | ||||||||
Y54G2A.17a.3:c.1179+1318A>T | ||||||||
Y54G2A.17a.1:c.1179+1318A>T | ||||||||
Y54G2A.17a.2:c.1179+1318A>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2877944T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TAATTCGAACAACTTTTTTTTTGTAAAATT | AAAAAAAAACGGGGTTTTTTTTCAAAAAAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2877942 | 2877942 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.3:c.1179+1318A>T | |||||||
Intron_number | 4/7 | |||||||
Y54G2A.17b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17b.1:c.1239+1318A>T | |||||||
Intron_number | 5/7 | |||||||
Y54G2A.17a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.1179+1318A>T | |||||||
Intron_number | 5/8 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.1179+1318A>T | |||||||
Intron_number | 5/8 | |||||||
Method | WGS_Flibotte |